Bowtie 2

Fast and sensitive read alignment

Site Map

Latest Release

Bowtie2 v2.5.3 01/16/24 

Please cite: Langmead B, Salzberg S. Fast gapped-read alignment with Bowtie 2. Nature Methods. 2012, 9:357-359.

Links

Indexes

Publications

Contributors

  • Ben Langmead
  • Daehwan Kim
  • Rone Charles
  • Nae-Chyun Chen
  • Chris Wilks
  • Valentin Antonescu

Tools that use Bowtie (or Bowtie 2):

OS distributions with Bowtie packages

Commercial products using Bowtie:

Published protocols using Bowtie 1 and/or 2: